The detailed information of tRNA gene sequence


Sequence ID>WENV181230056
Genome IDOFEK01000230
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 75427
End posion on genome 75500
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cggcgcttaa
tRNA gene sequence 
GGGCCCATAGCTTAGCCAGGTAGAGCGCCCGGCTCATAACCGGGCGGCCATGGGTTCGAA
CCCCATTGGGCCCAttt
Downstream region at tRNA end position 
actaacaccc
Secondary structure (Cloverleaf model)
>WENV181230056	Ile2	CAT
                   a      Attt actaacaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     T A C C C     A
      C G A        A      | | | | |     G
    C       T T C G       A T G G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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