The detailed information of tRNA gene sequence


Sequence ID>WENV181230101
Genome IDOFEK01000289
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 38912
End posion on genome 38989
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aacccggcga
tRNA gene sequence 
AGCGGGGTGGGGTAGTCAGGAAATCCCGACGGGCTCATAACCCGTAGATCAGTAGTTCAA
ATCTACTCCCCGCTACCA
Downstream region at tRNA end position 
ttttaccagt
Secondary structure (Cloverleaf model)
>WENV181230101	fMet	CAT
                   a      ACCA ttttaccagt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C A T C     A
    C T G A        G      | | | | |     A
  A         T G G G       A G T A G     C
  G           | | |                 T T
  G         T C C C
    A A A          G     AGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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