The detailed information of tRNA gene sequence


Sequence ID>WENV181230131
Genome IDOFEK01000315
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 46952
End posion on genome 47044
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aggactgtcc
tRNA gene sequence 
GGAGGGATGGCCGAGCGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTTCCGTTAGCAGCG
GGACCGTGGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
accccgagga
Secondary structure (Cloverleaf model)
>WENV181230131	Ser	TGA
                   c      GCCA accccgagga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      C G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTTCCGTTAGCAGCGGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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