The detailed information of tRNA gene sequence


Sequence ID>WENV181230301
Genome IDOFEK01000592
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 12254
End posion on genome 12170
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcaataaat
tRNA gene sequence 
GCCGGGATAGTCTAGTCAGGTAAGGCGTAGGATTCGAAATCCTATGAGCGATGCTCACCC
TGGGTTCAAATCCCAGTCCCGGCGCtt
Downstream region at tRNA end position 
attaaaaaaa
Secondary structure (Cloverleaf model)
>WENV181230301	Ser	CGA
                   t      GCtt attaaaaaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        A      | | | | |     A
    C       T C T G       C T G G G     C
    A       | | + |                 T T
    G       A G G C
      G T A        G     TGAGCGATGCTCACC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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