The detailed information of tRNA gene sequence


Sequence ID>WENV181230330
Genome IDOFEK01000660
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 30706
End posion on genome 30634
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcacaccctt
tRNA gene sequence 
GGGCTCGTAGATCAGGGGTAGATCGCTACGTTCGCAACGTAGAGGCCGCGGGTTCAAATC
CCGCCGGGTCCACtc
Downstream region at tRNA end position 
ttcttgtttt
Secondary structure (Cloverleaf model)
>WENV181230330	Ala	CGC
                   t      ACtc ttcttgtttt
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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