The detailed information of tRNA gene sequence


Sequence ID>WENV181230419
Genome IDOFEK01000865
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 541
End posion on genome 616
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
attgataaaa
tRNA gene sequence 
GCTCCGGTGGTGTAGACCGGCCAATCATTCGAGCTTCTCGAGCTTGAGACCTGGGTTCAA
ATCCCAGCCGGAGCACtg
Downstream region at tRNA end position 
tttttacaaa
Secondary structure (Cloverleaf model)
>WENV181230419	Glu	CTC
                   a      ACtg tttttacaaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G A C C C     A
    C A G A        G      | | | | |     A
  C         T G T G       C T G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        T     AGAC
                    C - G
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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