The detailed information of tRNA gene sequence


Sequence ID>WENV181230450
Genome IDOFEK01000974
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 536
End posion on genome 461
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
cgttctcaaa
tRNA gene sequence 
GCGGGAGTAGCTCAGTGGCTAGAGCGTCAGCCTTCCAAGCTGAGGGTCGCGGGTTCGAAT
CCCGTTTCCCGCTCCA
Downstream region at tRNA end position 
aatacttttt
Secondary structure (Cloverleaf model)
>WENV181230450	Gly	TCC
                   a      TCCA aatacttttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    C       G A G C
      T A          G     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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