The detailed information of tRNA gene sequence


Sequence ID>WENV181230488
Genome IDOFEK01001159
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 759
End posion on genome 834
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atttcaaacT
tRNA gene sequence 
GGGCCCATGGTCTAGTTGGTCATGACGTCACCCTCACACGGTGGAGGTCCTGGGTTCGAA
TCCCAGTGGGCCCATat
Downstream region at tRNA end position 
ctaacaaata
Secondary structure (Cloverleaf model)
>WENV181230488	Val	CAC
                   T      ATat ctaacaaata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    T       T C T G       C T G G G     C
    G         | | |                 T T
    G       T G A C
      T C A        G     AGGTC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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