The detailed information of tRNA gene sequence


Sequence ID>WENV181230747
Genome IDOFEK01002873
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 1723
End posion on genome 1649
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
acagatggga
tRNA gene sequence 
AGCGAGGTGGGGTAGTCAGGAAATCCCGGCGGGCTCATAACCCGTAGACCGATGGTTCAA
ATCCATCCCTCGCTAtgt
Downstream region at tRNA end position 
tcggttcttc
Secondary structure (Cloverleaf model)
>WENV181230747	fMet	CAT
                   a      Atgt tcggttcttc
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | | | | |     A
  A         T G G G       G A T G G     C
  G           | | |                 T T
  G         T C C C
    A A A          G     AGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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