The detailed information of tRNA gene sequence


Sequence ID>WENV181230789
Genome IDOFEK01003426
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 1744
End posion on genome 1671
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggatttagt
tRNA gene sequence 
GGCACCGTAGCTCAGGGGTTAGAGCGGGCGTTTCATAAGCGCTAGGTCAGTGGTTCGATT
CCACTCGGTGCCACga
Downstream region at tRNA end position 
caattatatt
Secondary structure (Cloverleaf model)
>WENV181230789	Met	CAT
                   t      ACga caattatatt
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T T
                    T     T C A C C     A
      G G A        A      | | | | |     G
    G       C T C G       A G T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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