The detailed information of tRNA gene sequence


Sequence ID>WENV181230793
Genome IDOFEK01003458
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 5449
End posion on genome 5534
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgcttcata
tRNA gene sequence 
GCCGGGGTTGCTGAGCTTGGTACGGCGCGGGCCTGGAAAGCCCGTTCTCCTCTGGAGTGC
ATGGGTTCAAATCCCATCCCCGGCGCta
Downstream region at tRNA end position 
tggtgattat
Secondary structure (Cloverleaf model)
>WENV181230793	Ser	GGA
                   a      GCta tggtgattat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        T      | | | | |     A
    T       G T C G       A T G G G     C
    T       | + | |                 T T
    G       C G G C
      G T A        G     TTCTCCTCTGGAGTGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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