The detailed information of tRNA gene sequence


Sequence ID>WENV181231114
Genome IDOFEK01010034
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 320
End posion on genome 231
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgggcatcga
tRNA gene sequence 
GGAGAGATGGCCGAGAGGTCGAAGGCGGCAGACTCGAAATCTGTTGAACGGCTTGCCGTT
CCTAGGGTTCGAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
gtaaaatcaa
Secondary structure (Cloverleaf model)
>WENV181231114	Ser	CGA
                   a      GCCA gtaaaatcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       T A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGAACGGCTTGCCGTTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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