The detailed information of tRNA gene sequence


Sequence ID>WENV181231170
Genome IDOFEK01012292
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 2683
End posion on genome 2610
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nggcagacac
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGAGCCCAtca
Downstream region at tRNA end position 
ctctttcttt
Secondary structure (Cloverleaf model)
>WENV181231170	Val	GAC
                   c      Atca ctctttcttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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