The detailed information of tRNA gene sequence


Sequence ID>WENV181231281
Genome IDOFEK01017838
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 1684
End posion on genome 1610
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaaaattat
tRNA gene sequence 
GGCGAGATAGCTCAGATGGTTAGAGCGTCGGATTCATAACCCGGAGGTCCCGAGTTCAAC
TCTCGGTCTCGCTACac
Downstream region at tRNA end position 
acaaagtctg
Secondary structure (Cloverleaf model)
>WENV181231281	Met	CAT
                   t      ACac acaaagtctg
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    T     G G C T C     A
      A G A        A      | | | | |     A
    T       C T C G       C C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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