The detailed information of tRNA gene sequence


Sequence ID>WENV181231304
Genome IDOFEK01018806
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 1657
End posion on genome 1581
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cagtaagtac
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGCCTAGGACGCTGCCCTCTCAAGGCAGAGATCACGGGTTCGAA
TCCCGTAGGGGCCGCCA
Downstream region at tRNA end position 
aattttcccg
Secondary structure (Cloverleaf model)
>WENV181231304	Glu	CTC
                   c      GCCA aattttcccg
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     AGATC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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