The detailed information of tRNA gene sequence


Sequence ID>WENV181231498
Genome IDOFEK01032371
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 101
End posion on genome 177
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ccaggcattc
tRNA gene sequence 
GCGCTCGTAGCTCAGCTGGATAGAGCAATGGCCTTCGAAGCCATTGGCCGGGGGTTCGAA
TCCCTCCGGGCGCGCCA
Downstream region at tRNA end position 
taaaaaacaa
Secondary structure (Cloverleaf model)
>WENV181231498	Arg	TCG
                   c      GCCA taaaaaacaa
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGCC
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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