The detailed information of tRNA gene sequence


Sequence ID>WENV181231542
Genome IDOFEK01036052
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 86
End posion on genome 2
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttttgggaaa
tRNA gene sequence 
GCGAGGGTAGGCAAGCCTGGCCAAAACCGGCGGACTTAAGATCCGTTCTCGCAGGAGTTC
GTGGGTTCGAATCCCACCCCTCGCAtnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV181231542	Leu	TAA
                   a      Atnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  T         A C G G       G T G G G     C
  G             | |                 T T
  G         A A C C
    C C A A        G     TCTCGCAGGAGTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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