The detailed information of tRNA gene sequence


Sequence ID>WENV181231664
Genome IDOFEK01047900
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 117
End posion on genome 201
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cgaaaaaagT
tRNA gene sequence 
GCGAGTGTTACCGAGCGGCCAAAGGTGATCGACTCAAGATCGATTCTCGTAGGAGTTCGC
AGGTTCGAATCCTGCCACTCGCATta
Downstream region at tRNA end position 
ccattttagg
Secondary structure (Cloverleaf model)
>WENV181231664	Leu	CAA
                   T      ATta ccattttagg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        T      | | | | |     G
    G       G C C A       G C A G G     C
    G         | | |                 T T
    C       A G G T
      C A A        G     TCTCGTAGGAGTTC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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