The detailed information of tRNA gene sequence


Sequence ID>WENV181231886
Genome IDOFEK01082656
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 88
End posion on genome 3
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataaatcatt
tRNA gene sequence 
GCAGGGGTGGCCCAGCCTGGTACGGCGTGGGACTGCTAATCCCATGATCCTTTGGATCTC
GCGGGTTCAAATCCCGTCCCCTGCGCtt
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV181231886	Ser	GCT
                   t      GCtt nnnnnnnnnn
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     A
    C       C C C G       G C G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TGATCCTTTGGATCTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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