The detailed information of tRNA gene sequence


Sequence ID>WENV181231901
Genome IDOFEK01084354
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 411
End posion on genome 335
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
accgatttga
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
aacaatatca
Secondary structure (Cloverleaf model)
>WENV181231901	fMet	CAT
                   a      ACCA aacaatatca
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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