The detailed information of tRNA gene sequence


Sequence ID>WENV181231922
Genome IDOFEK01090087
Search identical group
Phylum/Class[OFEK] activated sludge metagenome; Anaerobic digester
Species
Start position on genome 78
End posion on genome 3
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgcatctcc
tRNA gene sequence 
GGGCCCGTAGCTTAGTCCGGTTAGAGCGCCCGGCTCATAACCGGGCGGTCGTGGGTTCGA
ATCCCTCCGGGCCCACtc
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV181231922	Met	CAT
                   c      ACtc nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        A      |   | | |     G
  C         T T C G       G T G G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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