The detailed information of tRNA gene sequence


Sequence ID>WENV181233560
Genome IDOFET01000007
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 398870
End posion on genome 398794
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gccagtttga
tRNA gene sequence 
TGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTCGAA
TCCAGCCCCCGCTACCA
Downstream region at tRNA end position 
tacagaaaag
Secondary structure (Cloverleaf model)
>WENV181233560	fMet	CAT
                   a      ACCA tacagaaaag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | + | | |     G
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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