The detailed information of tRNA gene sequence


Sequence ID>WENV181233659
Genome IDOFET01000030
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 249784
End posion on genome 249857
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcggcggcaa
tRNA gene sequence 
GGCGGGTTGGCGGAGAGGTTACGCAGCGGATTGCAAATCCGTGTAGACCGGTTCGATTCC
GGTACCCGCCTCCA
Downstream region at tRNA end position 
gcatgccgac
Secondary structure (Cloverleaf model)
>WENV181233659	Cys	GCA
                   a      TCCA gcatgccgac
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     T G G C C     A
        G A        G      | | | | |     G
      A     G G C G       A C C G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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