The detailed information of tRNA gene sequence


Sequence ID>WENV181233696
Genome IDOFET01000048
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 147139
End posion on genome 147063
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
acttcaaatt
tRNA gene sequence 
GGCCCCTTAGCTCAGTTGGTTAGAGCACCCGACTCATAATCGGTAGGTCCCCAGTTCAAG
TCTGGGAGGGGCCACCA
Downstream region at tRNA end position 
ttttaaagcc
Secondary structure (Cloverleaf model)
>WENV181233696	Ile2	CAT
                   t      ACCA ttttaaagcc
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G G G T C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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