The detailed information of tRNA gene sequence


Sequence ID>WENV181233823
Genome IDOFET01000126
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 60392
End posion on genome 60475
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aagcagacaa
tRNA gene sequence 
GGGGGAATACCAAAGCGGCCAACTGGGACGGACTGTAAATCCGTTGACTTATGTCTTCAC
AGGTTCGAATCCTGTTTCCCCCACat
Downstream region at tRNA end position 
tgccgaattg
Secondary structure (Cloverleaf model)
>WENV181233823	Tyr	GTA
                   a      ACat tgccgaattg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    G       A A C C       A C A G G     C
    G         | | |                 T T
    C       C T G G
      C A A        G     TGACTTATGTCTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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