The detailed information of tRNA gene sequence


Sequence ID>WENV181233825
Genome IDOFET01000126
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 60655
End posion on genome 60727
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tcgggtaaaa
tRNA gene sequence 
GCCGACGTAGCTCAGGGGTAGAGTACTTCCTTGGTAAGGAAGGGGTCACGGGTTCAAATC
CCGTCGTTGGCTCtt
Downstream region at tRNA end position 
aacggcttat
Secondary structure (Cloverleaf model)
>WENV181233825	Thr	GGT
                   a      TCtt aacggcttat
                     G - C
                     C - G
                     C - G
                     G + T
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     A
      G     C T C G       A C G G G     C
      G     | | | +                 T T
      G     G A G T
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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