The detailed information of tRNA gene sequence


Sequence ID>WENV181233829
Genome IDOFET01000129
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 24047
End posion on genome 24123
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atttccatgt
tRNA gene sequence 
GCGCCCATAGCTCAACCGGATAGAGCAACGGCCTTCTAAGCCGTAGGTTGCAGGTTCGAA
TCCTGCTGGGCGCGCCA
Downstream region at tRNA end position 
tttgtgccag
Secondary structure (Cloverleaf model)
>WENV181233829	Arg	TCT
                   t      GCCA tttgtgccag
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G T C C     A
      C A A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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