The detailed information of tRNA gene sequence


Sequence ID>WENV181233856
Genome IDOFET01000155
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 64026
End posion on genome 64102
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
accctcgcgt
tRNA gene sequence 
GCCGCCTTAGCTCAGTTGGTTAGAGCGCTAGATTGTGGATCTAGAGGTCGCCCGTTCGAT
CCGGGCAGGCGGTACCA
Downstream region at tRNA end position 
caaaatcgag
Secondary structure (Cloverleaf model)
>WENV181233856	His	GTG
                   t      ACCA caaaatcgag
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     C G G G C     A
      T G A        A      | | | | |     G
    T       C T C G       G C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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