The detailed information of tRNA gene sequence


Sequence ID>WENV181233861
Genome IDOFET01000163
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 45800
End posion on genome 45874
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aattattgat
tRNA gene sequence 
GGGCCTATAACTCAGCTGGTTAGAGTATCTGACTCATAATCAGAAAGTCCCTGGTTCGAG
CCCAGGTGGGCCCACtt
Downstream region at tRNA end position 
accccgttta
Secondary structure (Cloverleaf model)
>WENV181233861	Ile2	CAT
                   t      ACtt accccgttta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     G G A C C     A
      C G A        A      | | | | |     G
    T       C T C A       C C T G G     C
    G       | | | |                 T T
    G       G A G T
      T T A        A     AAGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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