The detailed information of tRNA gene sequence


Sequence ID>WENV181233863
Genome IDOFET01000171
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 79469
End posion on genome 79559
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cccgtaagcc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCAAAGGTGAATAGCCT
TTCCAGGGTTCGAATCCCTGTCCCTCCGCCA
Downstream region at tRNA end position 
tacagacatg
Secondary structure (Cloverleaf model)
>WENV181233863	Ser	TGA
                   c      GCCA tacagacatg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAAGGTGAATAGCCTTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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