The detailed information of tRNA gene sequence


Sequence ID>WENV181233940
Genome IDOFET01000370
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 18779
End posion on genome 18705
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ggctcacggc
tRNA gene sequence 
GCTGCTGTAGCTCAGAGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCGAGAGTTCAATTC
TCTCCAGCAGCACCA
Downstream region at tRNA end position 
ttcctctcgc
Secondary structure (Cloverleaf model)
>WENV181233940	Thr	GGT
                   c      ACCA ttcctctcgc
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     C T C T C     A
        G A        A      | | | | |     A
      A     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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