The detailed information of tRNA gene sequence


Sequence ID>WENV181233982
Genome IDOFET01000563
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 4671
End posion on genome 4596
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gaaagcaaat
tRNA gene sequence 
GGGAGCTTAGCTCAGTTGGTTCAGAGCATCTGCCTTACAAGCAGAGGGTCGGGGGTTCGA
ATCCCTCAGCTCCCACat
Downstream region at tRNA end position 
ctaattttct
Secondary structure (Cloverleaf model)
>WENV181233982	Val	TAC
                   t      ACat ctaattttct
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A          T A
                    T     C T C C C     A
    T T G A        A      | + | | |     G
  G         C T C G       G G G G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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