The detailed information of tRNA gene sequence


Sequence ID>WENV181234001
Genome IDOFET01000692
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 15839
End posion on genome 15928
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgtcccgcc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTTAAGGCGCACGCCTGGAACGCGTGTATACGGGAAACCGTA
TCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV181234001	Ser	GGA
                   c      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK