The detailed information of tRNA gene sequence


Sequence ID>WENV181234118
Genome IDOFET01004708
Search identical group
Phylum/Class[OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis
Species
Start position on genome 1
End posion on genome 76
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCGTCGGTTCGATC
CCGTCTGGCTCCACCA
Downstream region at tRNA end position 
tttagatggt
Secondary structure (Cloverleaf model)
>WENV181234118	Ala	TGC
                   n      ACCA tttagatggt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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