The detailed information of tRNA gene sequence


Sequence ID>WENV181234204
Genome IDOFEU01000004
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 208302
End posion on genome 208392
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tggagaaaac
tRNA gene sequence 
GGTGGGCTGGCAGAGTGGCTGAATGCAGCGGTCTTGAAAACCGCCGAAGGTTAGTAGCCT
TCCCGGGGTTCGAATCCCTGGCCCACCGCCA
Downstream region at tRNA end position 
ctttctcttc
Secondary structure (Cloverleaf model)
>WENV181234204	Ser	TGA
                   c      GCCA ctttctcttc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     CGAAGGTTAGTAGCCTTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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