The detailed information of tRNA gene sequence


Sequence ID>WENV181234261
Genome IDOFEU01000015
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 105855
End posion on genome 105781
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gccgtccacc
tRNA gene sequence 
GGGTGATTAGCTCAGTGGTAGAGCGCTTCGTTCACATCGAAGATGTCGGGAGTTCAAATC
TCTCATCACCCACCA
Downstream region at tRNA end position 
gaattccggg
Secondary structure (Cloverleaf model)
>WENV181234261	Val	CAC
                   c      ACCA gaattccggg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     C T C T C     A
        G A        A      | + | | |     A
      T     C T C G       G G G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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