The detailed information of tRNA gene sequence


Sequence ID>WENV181234287
Genome IDOFEU01000022
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 200302
End posion on genome 200378
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgaagcctgt
tRNA gene sequence 
CGGGGCGTGGCGCAGCCTGGTAGCGCGACGGTTTTGGGTACCGTAGGTCGTAGGTTCGAA
TCCTATCGCCCCGACCA
Downstream region at tRNA end position 
ttgaaaacct
Secondary structure (Cloverleaf model)
>WENV181234287	Pro	TGG
                   t      ACCA ttgaaaacct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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