The detailed information of tRNA gene sequence


Sequence ID>WENV181234391
Genome IDOFEU01000095
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 118358
End posion on genome 118442
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aaaaattcgt
tRNA gene sequence 
GGAGGGGTTCCCGAGCGGTCAAAGGGATCAGACTGTAAATCTGACGGCTCAGCCTTCGCA
GGTTCGAATCCTGCCCCCTCCACCA
Downstream region at tRNA end position 
tttttttgca
Secondary structure (Cloverleaf model)
>WENV181234391	Tyr	GTA
                   t      ACCA tttttttgca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G C A G G     C
    G         | | |                 T T
    T       A G G G
      C A A        A     CGGCTCAGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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