The detailed information of tRNA gene sequence


Sequence ID>WENV181234403
Genome IDOFEU01000101
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 74136
End posion on genome 74212
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ctgagacgta
tRNA gene sequence 
CGGAGCGTGGCGCAGCTTGGTAGCGCGTTGCAATGGGGTTGCAAAGGTCGCAGGTTCGAA
TCCTGTCGCTCCGACCA
Downstream region at tRNA end position 
aaatatataa
Secondary structure (Cloverleaf model)
>WENV181234403	Pro	GGG
                   a      ACCA aaatatataa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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