The detailed information of tRNA gene sequence


Sequence ID>WENV181234436
Genome IDOFEU01000129
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 74010
End posion on genome 73934
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcctagttac
tRNA gene sequence 
AGGGGCGTAGTTCCAATTGGTAGAACAGCGGTCTCCAAAACCGACGGTTGGGGGTTCGAA
TCCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
acttcttcta
Secondary structure (Cloverleaf model)
>WENV181234436	Trp	CCA
                   c      GCCA acttcttcta
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T T G       G G G G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     CGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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