The detailed information of tRNA gene sequence


Sequence ID>WENV181234451
Genome IDOFEU01000148
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 4811
End posion on genome 4736
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gggccggcac
tRNA gene sequence 
GCCGCTGTAGCTCAGCTGGTAGAGCACGTCATTCGTAATGATGGGGTCGGGGGTTCGAGT
CCCTTCAGCGGCACCA
Downstream region at tRNA end position 
ctcttctctc
Secondary structure (Cloverleaf model)
>WENV181234451	Thr	CGT
                   c      ACCA ctcttctctc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T T C C C     A
      C G A        A      + + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G + T
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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