The detailed information of tRNA gene sequence


Sequence ID>WENV181234468
Genome IDOFEU01000185
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 11484
End posion on genome 11555
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
tgagcgttct
tRNA gene sequence 
GCGGGTGTAGCTCAGTGGTAGAGCGTCACCTTGCCAAGGTGAATGTCGCGCGTTCGAATC
GCGTCACCCGCTttt
Downstream region at tRNA end position 
tacccgcttc
Secondary structure (Cloverleaf model)
>WENV181234468	Gly	GCC
                   t      Tttt tacccgcttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G C G C     A
        G A        A      + | | | |     G
      T     C T C G       G C G C G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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