The detailed information of tRNA gene sequence


Sequence ID>WENV181234504
Genome IDOFEU01000227
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 47594
End posion on genome 47518
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cgacaggcgt
tRNA gene sequence 
GGCCCCGTGGCTCAACTGGATAGAGCAATCCCCTCCTAAGGGATAGGTTGCAGGTTCGAG
TCCTGCCGGGGTCACCA
Downstream region at tRNA end position 
tggaacacct
Secondary structure (Cloverleaf model)
>WENV181234504	Arg	CCT
                   t      ACCA tggaacacct
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C A A        G      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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