The detailed information of tRNA gene sequence


Sequence ID>WENV181234530
Genome IDOFEU01000291
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 36244
End posion on genome 36168
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gtttccgggc
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCAGAGCGCTCATAACGCTTTGGTTGGGGGTTCGAG
TCCCTCCGGGCCTACCA
Downstream region at tRNA end position 
tcatttgaca
Secondary structure (Cloverleaf model)
>WENV181234530	Ile2	CAT
                   c      ACCA tcatttgaca
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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