The detailed information of tRNA gene sequence


Sequence ID>WENV181234539
Genome IDOFEU01000309
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 19805
End posion on genome 19891
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gccgacaagt
tRNA gene sequence 
GCCCAGATGGCGGAATTGGTAGACGCACCGTCTTCAGGTGGCGGCGGGGGCAACCCCGTG
GAGGTTCGAGTCCTCTTCTGGGCACCA
Downstream region at tRNA end position 
tttccgttca
Secondary structure (Cloverleaf model)
>WENV181234539	Leu	CAG
                   t      ACCA tttccgttca
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGGGGCAACCCCGT
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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