The detailed information of tRNA gene sequence


Sequence ID>WENV181234628
Genome IDOFEU01000711
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 10939
End posion on genome 11014
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ccgccggcag
tRNA gene sequence 
GGGTGGTTAGCTCAGTTGGTAGAGCGCTTCGTTTACACCGAAGATGTCGGGGGTTCGAGC
CCCTCACCACCCACCA
Downstream region at tRNA end position 
ggcctcccgt
Secondary structure (Cloverleaf model)
>WENV181234628	Val	TAC
                   g      ACCA ggcctcccgt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     T - A          C G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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