The detailed information of tRNA gene sequence


Sequence ID>WENV181234661
Genome IDOFEU01001030
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 175
End posion on genome 101
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cttgattcaa
tRNA gene sequence 
GGGCCTGTAGCTCAGCGGTTAGAGCTGGCCGCTCATAACGGCTAGGTCGCGGGTTCGAAT
CCTGCCGGGCCCACCg
Downstream region at tRNA end position 
ggggcggggc
Secondary structure (Cloverleaf model)
>WENV181234661	Ile2	CAT
                   a      ACCg ggggcggggc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTC
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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