The detailed information of tRNA gene sequence


Sequence ID>WENV181234772
Genome IDOFEU01006444
Search identical group
Phylum/Class[OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium
Species
Start position on genome 340
End posion on genome 267
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
caaggcctac
tRNA gene sequence 
GCACCTCTAGCTCAATTGGCAGAGCAACTGACTCTTAATCAGTGGGTTCCGGGTTCAAGT
CCCGGGGGGTGTACga
Downstream region at tRNA end position 
aaaccccggt
Secondary structure (Cloverleaf model)
>WENV181234772	Lys	CTT
                   c      ACga aaaccccggt
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     G G C C C     A
      T A A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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