The detailed information of tRNA gene sequence


Sequence ID>WENV181367440
Genome IDOFQB01001511
Search identical group
Phylum/Class[OFQB] freshwater metagenome; Freshwater Lake
Species
Start position on genome 1437
End posion on genome 1362
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agaaagattt
tRNA gene sequence 
AGGGGCGTAGCTCAATTGGCAGAGCGTTGGTCTCCAAAACCAAAGGTTGGGGGTTCGATG
CCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
gcattttttt
Secondary structure (Cloverleaf model)
>WENV181367440	Trp	CCA
                   t      GCCA gcattttttt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          G T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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