The detailed information of tRNA gene sequence


Sequence ID>WENV181368459
Genome IDOFQL01006389
Search identical group
Phylum/Class[OFQL] freshwater metagenome; Freshwater Lake
Species
Start position on genome 721
End posion on genome 632
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccttgtactc
tRNA gene sequence 
GGAGACGTCGCATAGCCCGGTCGAGTGCGCCTCACTGCTAACGAGGTAAGGTGTAAAAGC
CTTCAGGAGTTCAAATCTCCTCGTCTCCGCag
Downstream region at tRNA end position 
attagttttt
Secondary structure (Cloverleaf model)
>WENV181368459	Ser	GCT
                   c      GCag attagttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C T C     A
    C C G A        C      | | | | |     A
  C         T A C G       A G G A G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAAGGTGTAAAAGCCTTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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